Cicer Genome Portal
Resources for the Cicer Genus
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Cicer (Chickpea)
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Cicer (Chickpea)
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Cicer Intermine
DSCensor Data Overviews
Cicer SequenceServer BLAST
Funnotate: Annotate Your Sequences
Cicer JBrowse2
Genome Context Viewer
Cicer WebApollo
ZZBrowse GWAS/QTL
LIS Germplasm GIS Viewer
Conekt Comparative Expression
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Home
Taxa
Cicer (Chickpea)
Collections
Cicer (Chickpea)
Tools
LIS Datastore
Cicer Intermine
DSCensor Data Overviews
Cicer SequenceServer BLAST
Funnotate: Annotate Your Sequences
Cicer JBrowse2
Genome Context Viewer
Cicer WebApollo
ZZBrowse GWAS/QTL
LIS Germplasm GIS Viewer
Conekt Comparative Expression
Gene Family Search
Blog
Community
Contact
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Data Collections
Cicer
Cicer
data collections
Cicer arietinum
Genomes
CDCFrontier.gnm1.GkHc
Genome assembly of Cicer arietinum CDCFrontier (kabuli variety).
CDCFrontier.gnm2.S2FF
Cicer arietinum genotype CDCFrontier genome assembly v2.0
CDCFrontier.gnm3.QT0P
Cicer arietinum genotype CDCFrontier genome assembly v3
ICC4958.gnm2.bg5m
Genome assembly of Cicer arietinum ICC4958 (desi variety).
Annotations
CDCFrontier.gnm1.ann1.nRhs
genome annotation of Cicer arietium (kabuli variety)
CDCFrontier.gnm2.ann1.9M1L
genome annotation of Cicer arietium (kabuli variety)
CDCFrontier.gnm3.ann1.NPD7
Genome annotation v1 of Cicer arietium genotype CDC Frontier assembly v3
ICC4958.gnm2.ann1.LCVX
genome annotation of Cicer arietium (desi variety)
Expression
CDCFrontier.gnm3.ann1.expr.CDC_Consul.Perilla-Henao_2018
Study of Nitrogen effects on gene expression from chickpea genotype CDC_Consul mapped to the CDCFrontier.gnm3.ann1 genome annotation.
CDCFrontier.gnm3.ann1.expr.Hybrid.Cook_2018
Study of development in a hybrid chickpea genotype with reads mapped to the CDCFrontier.gnm3.ann1 genome annotation.
CDCFrontier.gnm3.ann1.expr.mixed.Moenga_2018
Transcriptome regulation in chickpea in the presence and absence of drought stress.
CDCFrontier.gnm3.ann1.expr.mixed.Sutton_2018a
Study of salinity effects on gene expression from chickpea genotypes Genesis836 and Rupali mapped to the CDCFrontier.gnm3.ann1 genome annotation.
CDCFrontier.gnm3.ann1.expr.mixed.Sutton_2018b
Study of phytophthora effects on gene expression from chickpea genotypes Rupali and Yorker mapped to the CDCFrontier.gnm3.ann1 genome annotation.
ICC4958.gnm2.ann1.expr.ICC4958.Singh_Garg_2013
Chickpea Transcriptome Atlas - I
Diversity
CDCFrontier.div.vonWettberg_Chang_2018
Variant data, from genome resequencing of 279 Cicer accessions, called relative to Cicer arietium CDCFrontier (kabuli type).
Cicer echinospermum
Genomes
S2Drd065.gnm1.R888
Cicer echinospermum genotype S2Drd065 genome assembly v1
Annotations
S2Drd065.gnm1.ann1.YZ9H
Cicer arietinum genotype S2Drd065 genome assembly v1 annotation v1
Cicer reticulatum
Genomes
Besev079.gnm1.2FZC
Cicer reticulatum genotype Besev079 genome assembly v1
Annotations
Besev079.gnm1.ann1.F01Z
Cicer reticulatum annotation v1 for genotype Besev079 genome assembly v1